BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B09LP1|AL426162
(752 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1442 0.0
>3x_Contig1804
Length = 51183
Score = 1442 bits (727), Expect = 0.0
Identities = 748/753 (99%), Gaps = 2/753 (0%)
Strand = Plus / Minus
Query: 1 atctgctctgaggcgaattggtactttgagagacatagctatctttccgtgttgccaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37613 atctgctctgaggcgaattggtactttgagagacatagctatctttccgtgttgccaaag 37554
Query: 61 agtccaatgcttccttatgatagtaattccttaatttctgtagatttacttccctttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37553 agtccaatgcttccttatgatagtaattccttaatttctgtagatttacttccctttctt 37494
Query: 121 ccttcataagctccgcgggtagcagcaggcgtattcaatgtaggaatataactagtgata 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 37493 ccttcataagctccgcgg-tagcagcaggcgtattcaatgtaggaatataactagtgata 37435
Query: 181 taaggaattggagaaaattgtttgtattgaccatccttattgattgttttgaatgtagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37434 taaggaattggagaaaattgtttgtattgaccatccttattgattgttttgaatgtagat 37375
Query: 241 gggacgtcgttccattcataatttaaatggtaaggttgatcgtttttaatggcacgttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37374 gggacgtcgttccattcataatttaaatggtaaggttgatcgtttttaatggcacgttcc 37315
Query: 301 tcagatggcctgggatcctgactaagaggatcaagagcttccatattgaacgatgaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37314 tcagatggcctgggatcctgactaagaggatcaagagcttccatattgaacgatgaattt 37255
Query: 361 ggagctgacaaactatgcaatagctttatctgaggttccctttattttaaagtttattcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37254 ggagctgacaaactatgcaatagctttatctgaggttccctttattttaaagtttattcg 37195
Query: 421 actgttccttaattgatttgggggcggattgtaatatttattgttcgtttttctttttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37194 actgttccttaattgatttgggggcggattgtaatatttattgttcgtttttctttttgt 37135
Query: 481 cttttgtttttcaagtgggaatyatttattttgaagggcgtaaggcacggctactgggca 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 37134 cttttgtttttcaagtgggaattatttattttgaagggcgtaaggcacggctactgggca 37075
Query: 541 ggattttgtaatcaaagcagtcataaattgcaggttcttgcaacatacaatgaactcctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37074 ggattttgtaatcaaagcagtcataaattgcaggttcttgcaacatacaatgaactcctt 37015
Query: 601 gtaagttagttcacaagatagcctgattttggatggtgaatacaattttt-ttttttttt 659
||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||
Sbjct: 37014 gtaagttagttcacaagatagcctgattttggatggtgaataccaatttttttttttttt 36955
Query: 660 tattgaattatcaccaactttattgggaagaaaacgaaacggcacaaactaatatagatg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36954 tattgaattatcaccaactttattgggaagaaaacgaaacggcacaaactaatatagatg 36895
Query: 720 ctttgagatgtacataagaattgaagagtaata 752
|||||||||||||||||||||||||||||||||
Sbjct: 36894 ctttgagatgtacataagaattgaagagtaata 36862
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,962
Number of Sequences: 1807
Number of extensions: 15962
Number of successful extensions: 2274
Number of sequences better than 1.0e-20: 1
length of query: 752
length of database: 10,358,551
effective HSP length: 16
effective length of query: 736
effective length of database: 10,329,639
effective search space: 7602614304
effective search space used: 7602614304
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)